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Browsing バイオサイエンス領域 / Division of Biological Science by Submit Date

Browsing バイオサイエンス領域 / Division of Biological Science by Submit Date

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  • H3K27me3 demethylases alter HSP22 and HSP17.6C expression in response to recurring heat in Arabidopsis 
    Yamaguchi, Nobutoshi; Matsubara, Satoshi; Yoshimizu, Kaori; Seki, Motohide; Hamada, Kouta; Kamitani, Mari; Kurita, Yuko; Nomura, Yasuyuki; Nagashima, Kota; Inagaki, Soichi; Suzuki, Takamasa; Gan, Eng-Seng; To, Taiko; Kakutani, Tetsuji; Nagano, Atsushi J.; Satake, Akiko; Ito, Toshiro (Nature Research, 2021-06-09)
    Acclimation to high temperature increases plants’ tolerance of subsequent lethal high temperatures. Although epigenetic regulation of plant gene expression is well studied, how plants maintain a memory of environmental ...
  • Transcription factor RD26 is a key regulator of metabolic reprogramming during dark-induced senescence 
    Kamranfar, Iman; Xue, Gang-Ping; Tohge, Takayuki; Sedaghatmehr, Mastoureh; Fernie, Alisdair R.; Balazadeh, Salma; Mueller-Roeber, Bernd (Wiley/Blackwell, 2018-04-16)
    Leaf senescence is a key process in plants that culminates in the degradation of cellular constituents and massive reprogramming of metabolism for the recovery of nutrients from aged leaves for their reuse in newly developing ...
  • RAPTOR Controls Developmental Growth Transitions by Altering the Hormonal and Metabolic Balance 
    Salem, Mohamed A.; Li, Yan; Bajdzienko, Krzysztof; Fisahn, Joachim; Watanabe, Mutsumi; Hoefgen, Rainer; Schöttler, Mark Aurel; Giavalisco, Patrick (American Society of Plant Biologists, 2018-04-23)
    Vegetative growth requires the systemic coordination of numerous cellular processes, which are controlled by regulatory proteins that monitor extracellular and intracellular cues and translate them into growth decisions. ...
  • A MYB Triad Controls Primary and Phenylpropanoid Metabolites for Pollen Coat Patterning 
    Battat, Maor; Eitan, Asa; Rogachev, Ilana; Hanhineva, Kati; Fernie, Alisdair R.; Tohge, Takayuki; Beekwilder, Jules; Aharoni, Asaph (American Society of Plant Biologists, 2019-02-12)
    The pollen wall is a complex, durable structure essential for plant reproduction. A substantial portion of phenylpropanoids (e.g. flavonols) produced by pollen grain tapetal cells are deposited in the pollen wall. ...
  • The natural variance of the Arabidopsis floral secondary metabolites 
    Tohge, Takayuki; Borghi, Monica; Fernie, Alisdair R. (Nature Research, 2018-04-03)
    Application of mass spectrometry-based metabolomics enables the detection of genotype-related natural variance in metabolism. Differences in secondary metabolite composition of flowers of 64 Arabidopsis thaliana (Arabidopsis) ...
  • Shootin1a-mediated actin-adhesion coupling generates force to trigger structural plasticity of dendritic spines 
    Kastian, Ria Fajarwati; Minegishi, Takunori; Baba, Kentarou; Saneyoshi, Takeo; Katsuno-Kambe, Hiroko; Saranpal, Singh; Hayashi, Yasunori; Inagaki, Naoyuki (Cell Press, 2021-05-18)
    Dendritic spines constitute the major compartments of excitatory post-synapses. They undergo activity-dependent enlargement, which is thought to increase the synaptic efficacy underlying learning and memory. The ...
  • The Effect of Single and Multiple SERAT Mutants on Serine and Sulfur Metabolism 
    Watanabe, Mutsumi; Tohge, Takayuki; Fernie, Alisdair R.; Hoefgen, Rainer (Frontiers Media, 2018-05-28)
    The gene family of serine acetyltransferases (SERATs) constitutes an interface between the plant pathways of serine and sulfur metabolism. SERATs provide the activated precursor, O-acetylserine for the fixation of reduced ...
  • Extended darkness induces internal turnover of glucosinolates in Arabidopsis thaliana leaves 
    Brandt, Saskia; Fachinger, Sara; Tohge, Takayuki; Fernie, Alisdair R.; Braun, Hans- Peter; Hildebrandt, Tatjana M. (Public Library of Science, 2018-08-09)
    Prolonged darkness leads to carbohydrate starvation, and as a consequence plants degrade proteins and lipids to oxidize amino acids and fatty acids as alternative substrates for mitochondrial ATP production. We investigated, ...
  • The Role of Persulfide Metabolism During Arabidopsis Seed Development Under Light and Dark Conditions 
    Lorenz, Christin; Brandt, Saskia; Borisjuk, Ljudmilla; Rolletschek, Hardy; Heinzel, Nicolas; Tohge, Takayuki; Fernie, Alisdair R.; Braun, Hans-Peter; Hildebrandt, Tatjana M. (Frontiers Media, 2018-09-19)
    The sulfur dioxygenase ETHE1 oxidizes persulfides in the mitochondrial matrix and is involved in the degradation of L-cysteine and hydrogen sulfide. ETHE1 has an essential but as yet undefined function in early embryo ...
  • Metabolome and Lipidome Profiles of Populus × canescens Twig Tissues During Annual Growth Show Phospholipid-Linked Storage and Mobilization of C, N, and S 
    Watanabe, Mutsumi; Netzer, Florian; Tohge, Takayuki; Orf, Isabel; Brotman, Yariv; Dubbert, David; Fernie, Alisdair R.; Rennenberg, Heinz; Hoefgen, Rainer; Herschbach, Cornelia (Frontiers Media, 2018-09-05)
    The temperate climax tree species Fagus sylvatica and the floodplain tree species Populus × canescens possess contrasting phosphorus (P) nutrition strategies. While F. sylvatica has been documented to display P storage and ...
  • The ABCB7-Like Transporter PexA in Rhodobacter capsulatus Is Involved in the Translocation of Reactive Sulfur Species 
    Riedel, Simona; Siemiatkowska, Beata; Watanabe, Mutsumi; Müller, Christina S.; Schünemann, Volker; Hoefgen, Rainer; Leimkühler, Silke (Frontiers Media, 2019-03-13)
    The mitochondrial ATP-binding cassette (ABC) transporters ABCB7 in humans, Atm1 in yeast and ATM3 in plants, are highly conserved in their overall architecture and particularly in their glutathione binding pocket located ...
  • Opposite fates of the purine metabolite allantoin under water and nitrogen limitations in bread wheat 
    Casartelli, Alberto; Melino, Vanessa J.; Baumann, Ute; Riboni, Matteo; Suchecki, Radoslaw; Jayasinghe, Nirupama S.; Mendis, Himasha; Watanabe, Mutsumi; Erban, Alexander; Zuther, Ellen; Hoefgen, Rainer; Roessner, Ute; Okamoto, Mamoru; Heuer, Sigrid (Springer, 2019-03-01)
    The metabolite allantoin is an intermediate of the catabolism of purines (components of nucleotides) and is known for its housekeeping role in nitrogen (N) recycling and also for its function in N transport and storage in ...
  • Kingdom-wide comparison reveals the evolution of diurnal gene expression in Archaeplastida 
    Ferrari, Camilla; Proost, Sebastian; Janowski, Marcin; Becker, Jörg; Nikoloski, Zoran; Bhattacharya, Debashish; Price, Dana; Tohge, Takayuki; Bar-Even, Arren; Fernie, Alisdair R.; Stitt, Mark; Mutwil, Marek (Nature Research, 2019-02-13)
    Plants have adapted to the diurnal light-dark cycle by establishing elaborate transcriptional programs that coordinate many metabolic, physiological, and developmental responses to the external environment. These transcriptional ...
  • Enhancement of vitamin B6 levels in rice expressing Arabidopsis vitamin B6 biosynthesis de novo genes 
    Mangel, Nathalie; Fudge, Jared B.; Li, Kuan-Te; Wu, Ting-Ying; Tohge, Takayuki; Fernie, Alisdair R.; Szurek, Boris; Fitzpatrick, Teresa B.; Gruissem, Wilhelm; Vanderschuren, Hervé (Wiley, 2019-05-07)
    Vitamin B6 (pyridoxine) is vital for key metabolic reactions and reported to have antioxidant properties in planta. Therefore, enhancement of vitamin B6 content has been hypothesized to be a route to improve resistance to ...
  • Effect of Senescence Phenotypes and Nitrate Availability on Wheat Leaf Metabolome during Grain Filling 
    Heyneke, Elmien; Watanabe, Mutsumi; Erban, Alexander; Duan, Guangyou; Buchner, Peter; Walther, Dirk; Kopka, Joachim; Hawkesford, Malcolm John; Hoefgen, Rainer (MDPI, 2019-06-11)
    The capacity for optimising grain yield depends largely on the timing of senescence and the processes underlying efficient remobilisation and cycling of nutrients from source tissues to the developing grain. This study ...
  • Overexpression of the vascular brassinosteroid receptor BRL3 confers drought resistance without penalizing plant growth 
    Fàbregas, Norma; Lozano-Elena, Fidel; Blasco-Escámez, David; Tohge, Takayuki; Martínez-Andújar, Cristina; Albacete, Alfonso; Osorio, Sonia; Bustamante, Mariana; Riechmann, José Luis; Nomura, Takahito; Yokota, Takao; Conesa, Ana; Alfocea, Francisco Pérez; Fernie, Alisdair R.; Caño-Delgado, Ana I. (Nature Publishing Group, 2018-11-08)
    Drought represents a major threat to food security. Mechanistic data describing plant responses to drought have been studied extensively and genes conferring drought resistance have been introduced into crop plants. ...
  • Sulphur systems biology—making sense of omics data 
    Watanabe, Mutsumi; Hoefgen, Rainer (Oxford University Press, 2019-08-12)
    Systems biology approaches have been applied over the last two decades to study plant sulphur metabolism. These ‘sulphur-omics’ approaches have been developed in parallel with the advancing field of systems biology, which ...
  • The Acetate Pathway Supports Flavonoid and Lipid Biosynthesis in Arabidopsis 
    Perez de Souza, Leonardo; Garbowicz, Karolina; Brotman, Yariv; Tohge, Takayuki; Fernie, Alisdair R. (American Society of Plant Biologists, 2019-11-12)
    The phenylpropanoid pathway of flavonoid biosynthesis has been the subject of considerable research attention. By contrast, the proposed polyketide pathway, also known as the acetate pathway, which provides malonyl-CoA ...
  • Multi-tissue integration of transcriptomic and specialized metabolite profiling provides tools for assessing the common bean (Phaseolus vulgaris) metabolome 
    Perez de Souza, Leonardo; Scossa, Federico; Proost, Sebastian; Bitocchi, Elena; Papa, Roberto; Tohge, Takayuki; Fernie, Alisdair R. (Wiley Blackwell, 2018-11-27)
    Common bean (Phaseolus vulgaris L.) is an important legume species with a rich natural diversity of lan-draces that originated from the wild forms following multiple independent domestication events. After the publication ...
  • Non-aqueous fractionation revealed changing subcellular metabolite distribution during apple fruit development 
    Beshir, Wasiye F.; Tohge, Takayuki; Watanabe, Mutsumi; Hertog, Maarten L. A. T. M.; Hoefgen, Rainer; Fernie, Alisdair R.; Nicolaï, Bart M. (Springer Nature, 2019-08-11)
    In developing apple fruit, metabolic compartmentation is poorly understood due to the lack of experimental data. Distinguishing subcellular compartments in fruit using non-aqueous fractionation has been technically difficult ...

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